Protein_Domain

Part:BBa_K1363001

Designed by: Bo Dong   Group: iGEM14_USTC-China   (2014-09-29)

DgrB the receptor of c-di-GMP

Introduction

The concentration of c-di-GMP is varying, and for our experiment we will promote its expression to inhibit rotation of flagella. It will bind to DgrA and DgrB. The resulting complex will have two routes to go: one is the [c-di-GMP& DgrA] complex which will inhibit FliL, a protein bounds to the membrane playing a key role in rotation of flagella. The other route is that the DgrB will directly affect the rotation of the flagella.

Get the part

Fig 1

We get this part by PCR its gene from the genome of C.Crescentus. The standard parts construction have been accomplished, which helps motion regulation and holdfast biosynthesis of bacteria.

Reference

DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 162
    Illegal NgoMIV site found at 288
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 35


[edit]
Categories
Parameters
n/aDgrB the receptor of c-di-GMP